Text search

search Exact search

Found 265 results for log2(Irr24h/Irr12h) >= 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC451_29007 Mlig017551.g1 9.77 Mlig017551.g1 {REF} {Length: 791} {RNA1509_12716, RNA1509_24892, RNA1509_26026, RNA1509_39274, RNA1509_4287, RNA1509_6481, RNA1509_7128}
2. MligTC451_18221 Mlig027113.g1 7.87 Mlig027113.g1 {REF} {Length: 1181} {RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694}
3. MligTC451_18220 Mlig086101.g1 7.84 Mlig086101.g1 {REF} {Length: 876} {RNA1509_20075, RNA1509_21211, RNA1509_34228, RNA1509_8300}
4. MligTC451_33953 Mlig001660.g2 7.72 Mlig001660.g2 {REF} {Length: 1763} {RNA1509_1289, RNA1509_3516, RNA1509_5342}
5. MligTC451_26582 Mlig030327.g3, Mlig030327.g8, Mlig030327.g9 7.15 Muscle; Xins MYH6

Mlig030327.g3 {REF} {Length: 8014} {Pfam: Myosin head (motor domain) [PF00063.21, score=936.0]; Myosin tail [PF01576.19, score=588.6]; Myosin N-terminal SH3-like domain [PF02736.19, score=53.5]; Protein of unknown function (DUF1664) [PF07889.12, score=37.0]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2089, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2085, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2039, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2039, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2031, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=2028, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=1988, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2087, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2080, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2077, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2050, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2046, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2036, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=1997, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=1996, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2111, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1966, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2699, Expect=0.0]} {Ipul: Ipul011272.g6, Ipul011272.g6, [RH, Score=1956, Expect=0.0]} {RNA1509_4871} {SMEDTYPE: Muscle [dd_Smed_v6_579_0_1, myosin, heavy chain 7, cardiac muscle, beta (MYH7)]} {SMEDTYPE: Xins [raj_facs_types]}

Mlig030327.g8 {REF} {Length: 7459} {Pfam: Myosin head (motor domain) [PF00063.21, score=936.0]; Myosin tail [PF01576.19, score=588.6]; Myosin N-terminal SH3-like domain [PF02736.19, score=53.5]; Protein of unknown function (DUF1664) [PF07889.12, score=37.0]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2089, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2085, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2039, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2039, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2031, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=2028, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=1988, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2087, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2080, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2077, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2050, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2046, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2036, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=1997, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=1996, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2111, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1966, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2699, Expect=0.0]} {Ipul: Ipul011272.g6, Ipul011272.g6, [RH, Score=1956, Expect=0.0]} {RNA1509_27485, RNA1509_4871} {SMEDTYPE: Muscle [dd_Smed_v6_579_0_1, myosin, heavy chain 7, cardiac muscle, beta (MYH7)]} {SMEDTYPE: Xins [raj_facs_types]}

Mlig030327.g9 {REF} {Length: 8046} {Pfam: Myosin head (motor domain) [PF00063.21, score=936.2]; Myosin tail [PF01576.19, score=588.7]; Myosin N-terminal SH3-like domain [PF02736.19, score=53.6]; Protein of unknown function (DUF1664) [PF07889.12, score=37.9]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2093, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2086, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2045, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2044, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2035, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=2033, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=1994, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2090, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2084, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2080, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2056, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2053, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2043, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=2001, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=2001, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2114, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1969, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2701, Expect=0.0]} {Ipul: Ipul011272.g6, Ipul011272.g6, [RH, Score=1951, Expect=0.0]} {RNA1509_24926, RNA1509_24933, RNA1509_35611, RNA1509_36094, RNA1509_4871} {SMEDTYPE: Muscle [dd_Smed_v6_579_0_1, myosin, heavy chain 7, cardiac muscle, beta (MYH7)]} {SMEDTYPE: Xins [raj_facs_types]}
6. MligTC451_30556 Mlig026130.g3 7.06 Mlig026130.g3 {REF} {Length: 4255} {RNA1509_1530, RNA1509_170, RNA1509_6079}
7. MligTC451_36556 Mlig032221.g6, Mlig086319.g1, Mlig032221.g3 6.71 Gamma neoblasts; Xins ACTG1

Mlig032221.g6 {REF} {Length: 1763} {Pfam: Actin [PF00022.19, score=503.9]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=771, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=771, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=772, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=762, Expect=0.0]} {Ipul: Ipul012287.g6, Ipul012287.g6, [RH, Score=769, Expect=0.0]} {RNA1509_19403, RNA1509_33717, RNA1509_819} {SMEDTYPE: Gamma neoblasts [dd_Smed_v6_3_0_1, actin, beta (ACTB)]} {SMEDTYPE: Xins [raj_facs_types]}

Mlig086319.g1 {REF} {Length: 1600} {Pfam: Actin [PF00022.19, score=503.9]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=771, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=771, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=772, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=762, Expect=0.0]} {Ipul: Ipul012287.g6, Ipul012287.g6, [RH, Score=769, Expect=0.0]} {RNA1509_819} {SMEDTYPE: Gamma neoblasts [dd_Smed_v6_3_0_1, actin, beta (ACTB)]} {SMEDTYPE: Xins [raj_facs_types]}

Mlig032221.g3 {REF} {Length: 1789} {Pfam: Actin [PF00022.19, score=503.9]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=771, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=771, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=772, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=762, Expect=0.0]} {Ipul: Ipul012287.g6, Ipul012287.g6, [RH, Score=769, Expect=0.0]} {RNA1509_819} {SMEDTYPE: Gamma neoblasts [dd_Smed_v6_3_0_1, actin, beta (ACTB)]} {SMEDTYPE: Xins [raj_facs_types]}
8. MligTC451_25639 Mlig005493.g2 6.44 Xins; Sexual_biased UCP3 Mlig005493.g2 {REF} {Length: 1746} {Pfam: Mitochondrial carrier protein [PF00153.27, score=207.8]} {Human: ENSG00000175564, UCP3, uncoupling protein 3, [RH, Score=254, Expect=8e-83]} {Mouse: ENSMUSG00000033685, Ucp2, uncoupling protein 2 (mitochondrial, proton carrier), [Score=258, Expect=1e-84]; ENSMUSG00000032942, Ucp3, uncoupling protein 3 (mitochondrial, proton carrier), [Score=251, Expect=1e-81]} {Dmel: FBgn0030872, Ucp4A, [Score=154, Expect=6e-44]} {Celegans: WBGene00006729, ucp-4, UnCoupling Protein (Mitochondrial substrate carrier), [Score=142, Expect=9e-40]} {Smed: dd_Smed_v6_13134_0_1, dd_Smed_v6_13134_0_1, [Score=126, Expect=5e-34]} {Ipul: Ipul015191.g1, Ipul015191.g1, [RH, Score=218, Expect=9e-69]} {RNA1509_15657, RNA1509_29319, RNA1509_57291, RNA1509_8586, RNA1509_8982} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.157693.0]}
9. MligTC451_52644 Mlig010720.g1 6.24 Muscle; Xins; Asexual_biased MYH2 Mlig010720.g1 {REF} {Length: 5673} {Pfam: Myosin tail [PF01576.19, score=242.9]; Intermediate filament protein [PF00038.21, score=31.5]; Autophagy protein 16 (ATG16) [PF08614.11, score=30.3]; Spc7 kinetochore protein [PF08317.11, score=26.7]; Protein of unknown function (DUF1664) [PF07889.12, score=20.8]; bZIP transcription factor [PF00170.21, score=19.5]} {Human: ENSG00000125414, MYH2, myosin heavy chain 2, [Score=352, Expect=2e-102]; ENSG00000092054, MYH7, myosin heavy chain 7, [Score=350, Expect=5e-102]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=350, Expect=1e-101]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=345, Expect=3e-100]; ENSG00000264424, MYH4, myosin heavy chain 4, [Score=339, Expect=4e-98]} {Mouse: ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [Score=355, Expect=7e-104]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=350, Expect=7e-102]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=347, Expect=4e-101]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [Score=342, Expect=3e-99]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [Score=342, Expect=2e-99]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=370, Expect=7e-109]} {Celegans: WBGene00006754, unc-15, Paramyosin, [Score=335, Expect=2e-101]} {Smed: dd_Smed_v6_711_0_1, dd_Smed_v6_711_0_1, [RH, Score=869, Expect=0.0]} {Ipul: Ipul001374.g2, Ipul001374.g2, [Score=265, Expect=1e-75]} {RNA1509_12725, RNA1509_1459, RNA1509_15702, RNA1509_18338, RNA1509_40749, RNA1509_4384, RNA1509_45769, RNA1509_47552} {SMEDTYPE: Muscle [dd_Smed_v6_711_0_1, myosin, heavy chain 1, skeletal muscle, adult (MYH1)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.391674.0]}
10. MligTC451_51790 Mlig031998.g1, Mlig031998.g4 6.23 Xins; Asexual_biased COL24A1

Mlig031998.g1 {REF} {Length: 4811} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.18, score=486.0]; Fibrillar collagen C-terminal domain [PF01410.18, score=80.3]; von Willebrand factor type C domain [PF00093.18, score=19.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=367, Expect=4e-104]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=419, Expect=3e-123]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=364, Expect=3e-103]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=306, Expect=1e-84]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=481, Expect=7e-145]} {Ipul: Ipul000930.g15, Ipul000930.g15, [Score=208, Expect=7e-55]} {RNA1509_4110} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.91059.0]}

Mlig031998.g4 {REF} {Length: 4812} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.18, score=486.8]; Fibrillar collagen C-terminal domain [PF01410.18, score=80.3]; von Willebrand factor type C domain [PF00093.18, score=19.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=365, Expect=2e-103]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=417, Expect=6e-123]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=362, Expect=1e-102]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=297, Expect=5e-82]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=489, Expect=1e-147]} {Ipul: Ipul000930.g15, Ipul000930.g15, [Score=204, Expect=8e-54]} {RNA1509_39580, RNA1509_4110, RNA1509_43475, RNA1509_47457} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.91059.0]}
11. MligTC451_40609 Mlig034205.g9, Mlig034205.g1 5.98 Muscle; Xins; Asexual_biased TTN

Mlig034205.g9 {REF} {Length: 15520} {Pfam: Immunoglobulin I-set domain [PF07679.16, score=944.4]; Fibronectin type III domain [PF00041.21, score=707.3]; Immunoglobulin domain [PF13927.6, score=576.8]; Immunoglobulin domain [PF13895.6, score=318.3]; Immunoglobulin domain [PF00047.25, score=258.4]; Protein kinase domain [PF00069.25, score=210.0]; Immunoglobulin V-set domain [PF07686.17, score=189.6]; Protein tyrosine kinase [PF07714.17, score=108.7]; CD80-like C2-set immunoglobulin domain [PF08205.12, score=69.4]; Purple acid Phosphatase, N-terminal domain [PF16656.5, score=64.7]; Natural killer cell receptor 2B4 [PF11465.8, score=56.2]; Izumo-like Immunoglobulin domain [PF16706.5, score=47.7]; Tissue factor [PF01108.17, score=35.9]; Immunoglobulin domain [PF18452.1, score=34.5]; Immunoglobulin C1-set domain [PF07654.15, score=33.2]; Fibronectin type III domain [PF16893.5, score=31.6]; Penicillin-Binding Protein C-terminus Family [PF06832.12, score=31.5]; Alphaherpesvirus glycoprotein E [PF02480.16, score=27.5]; C17orf99 Ig domain [PF17736.1, score=20.8]; CRISPR associated protein [PF08798.11, score=19.9]} {Human: ENSG00000155657, TTN, titin, [RH, Score=1214, Expect=0.0]} {Mouse: ENSMUSG00000051747, Ttn, titin, [RH, Score=1224, Expect=0.0]} {Dmel: FBgn0005666, bt, bent, [RH, Score=2332, Expect=0.0]} {Celegans: WBGene00006759, unc-22, Twitchin, [RH, Score=2221, Expect=0.0]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [Score=3598, Expect=0.0]} {Ipul: Ipul000957.g2, Ipul000957.g2, [Score=874, Expect=0.0]} {RNA1509_33534, RNA1509_577} {SMEDTYPE: Muscle [dd_Smed_v6_2544_0_1, hypothetical protein]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.642008.0]}

Mlig034205.g1 {REF} {Length: 16043} {Pfam: Immunoglobulin I-set domain [PF07679.16, score=542.5]; Fibronectin type III domain [PF00041.21, score=426.6]; Immunoglobulin domain [PF13927.6, score=357.8]; Immunoglobulin domain [PF13895.6, score=206.2]; Immunoglobulin domain [PF00047.25, score=156.9]; Immunoglobulin V-set domain [PF07686.17, score=125.7]; Purple acid Phosphatase, N-terminal domain [PF16656.5, score=46.2]; CD80-like C2-set immunoglobulin domain [PF08205.12, score=41.7]; Immunoglobulin domain [PF18452.1, score=36.3]; Izumo-like Immunoglobulin domain [PF16706.5, score=32.3]; Tissue factor [PF01108.17, score=26.9]; Alphaherpesvirus glycoprotein E [PF02480.16, score=25.9]; Immunoglobulin C1-set domain [PF07654.15, score=24.5]; CRISPR associated protein [PF08798.11, score=21.6]} {Human: ENSG00000155657, TTN, titin, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=692, Expect=0.0]} {Dmel: FBgn0005666, bt, bent, [Score=924, Expect=0.0]} {Celegans: WBGene00006759, unc-22, Twitchin, [Score=940, Expect=0.0]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [Score=1817, Expect=0.0]} {Ipul: Ipul000957.g2, Ipul000957.g2, [Score=523, Expect=8e-151]} {RNA1509_25367, RNA1509_577} {SMEDTYPE: Muscle [dd_Smed_v6_2544_0_1, hypothetical protein]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.642008.0]}
12. MligTC451_30191 Mlig021922.g33 5.97 Mlig021922.g33 {REF} {Length: 716} {RNA1509_4671}
13. MligTC451_21644 Mlig008077.g1 5.79 Mlig008077.g1 {REF} {Length: 8152} {Smed: dd_Smed_v6_7428_0_1, dd_Smed_v6_7428_0_1, [Score=62.4, Expect=9e-10]} {RNA1509_4076}
14. MligTC451_30889 Mlig027561.g10 5.73 Xins; Sexual_biased PPP1R3C Mlig027561.g10 {REF} {Length: 6544} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.13, score=81.8]; Starch/carbohydrate-binding module (family 53) [PF16760.5, score=52.5]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=119, Expect=1e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=113, Expect=9e-28]; ENSMUSG00000067279, Ppp1r3c, protein phosphatase 1, regulatory subunit 3C, [RH, Score=112, Expect=3e-27]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [RH, Score=119, Expect=8e-30]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [RH, Score=129, Expect=3e-33]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [Score=95.5, Expect=6e-22]} {Ipul: Ipul016814.g1, Ipul016814.g1, [Score=107, Expect=1e-24]} {RNA1509_13033, RNA1509_30877, RNA1509_59993} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.409202.0]}
15. MligTC451_30557 Mlig026130.g6, Mlig026130.g5 5.59

Mlig026130.g6 {REF} {Length: 3156} {RNA1509_1530}

Mlig026130.g5 {REF} {Length: 1958} {RNA1509_1530}
16. MligTC451_23301 Mlig012502.g3, Mlig012502.g1 5.57 Muscle; Xins; Asexual_biased COL24A1

Mlig012502.g3 {REF} {Length: 5850} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.18, score=449.2]; Fibrillar collagen C-terminal domain [PF01410.18, score=142.0]; von Willebrand factor type C domain [PF00093.18, score=28.5]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=238, Expect=1e-62]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=226, Expect=3e-59]; ENSMUSG00000026042, Col5a2, collagen, type V, alpha 2, [Score=218, Expect=9e-57]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=242, Expect=4e-64]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=228, Expect=6e-63]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=259, Expect=3e-70]} {Ipul: Ipul005603.g1, Ipul005603.g1, [Score=204, Expect=2e-60]} {RNA1509_6841} {SMEDTYPE: Muscle [dd_Smed_v6_740_0_1, collagen, type II, alpha 1 (COL2A1)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.260893.0]}

Mlig012502.g1 {REF} {Length: 5496} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.18, score=458.3]; Fibrillar collagen C-terminal domain [PF01410.18, score=142.9]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=354, Expect=1e-100]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=383, Expect=1e-111]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=348, Expect=1e-98]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=301, Expect=6e-84]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=464, Expect=2e-140]} {Ipul: Ipul000930.g12, Ipul000930.g12, [Score=203, Expect=9e-54]} {RNA1509_6841} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.91059.0]}
17. MligTC451_36557 Mlig032221.g1 5.54 Gamma neoblasts; Xins ACTG1 Mlig032221.g1 {REF} {Length: 1801} {Pfam: Actin [PF00022.19, score=503.9]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=771, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=771, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=747, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=746, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=745, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=742, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=772, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=762, Expect=0.0]} {Ipul: Ipul012287.g6, Ipul012287.g6, [RH, Score=769, Expect=0.0]} {RNA1509_819} {SMEDTYPE: Gamma neoblasts [dd_Smed_v6_3_0_1, actin, beta (ACTB)]} {SMEDTYPE: Xins [raj_facs_types]}
18. MligTC451_18654 Mlig073143.g2, Mlig073143.g1 5.43 URGCP

Mlig073143.g2 {REF} {Length: 7916} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.12, score=30.1]; Dynamin family [PF00350.23, score=24.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=131, Expect=5e-30]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=415, Expect=3e-118]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=412, Expect=2e-117]} {Ipul: Ipul002650.g2, Ipul002650.g2, [RH, Score=115, Expect=2e-25]} {RNA1509_1613, RNA1509_18470, RNA1509_28493, RNA1509_39168, RNA1509_4808, RNA1509_52709}

Mlig073143.g1 {REF} {Length: 7844} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.12, score=30.3]; Dynamin family [PF00350.23, score=24.6]; 50S ribosome-binding GTPase [PF01926.23, score=18.5]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=131, Expect=3e-30]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=404, Expect=1e-115]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=403, Expect=2e-115]} {Ipul: Ipul002650.g2, Ipul002650.g2, [RH, Score=116, Expect=1e-25]} {RNA1509_1613}
19. MligTC451_16814 Mlig004075.g2, Mlig004075.g1 5.27 Muscle; Xins; Asexual_biased COL24A1

Mlig004075.g2 {REF} {Length: 4504} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.18, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.18, score=120.3]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=412, Expect=2e-120]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=434, Expect=4e-130]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=374, Expect=3e-107]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=4e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [RH, Score=485, Expect=1e-149]} {Ipul: Ipul000930.g12, Ipul000930.g12, [Score=212, Expect=1e-56]} {RNA1509_2270} {SMEDTYPE: Muscle [dd_Smed_v6_740_0_1, collagen, type II, alpha 1 (COL2A1)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.260893.0]}

Mlig004075.g1 {REF} {Length: 5698} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.18, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.18, score=119.2]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=390, Expect=1e-112]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=359, Expect=5e-102]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=1e-105]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=324, Expect=4e-91]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=485, Expect=3e-149]} {Ipul: Ipul000930.g12, Ipul000930.g12, [Score=214, Expect=4e-57]} {RNA1509_2270} {SMEDTYPE: Muscle [dd_Smed_v6_740_0_1, collagen, type II, alpha 1 (COL2A1)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.260893.0]}
20. MligTC451_59343 Mlig034529.g2 5.27 X2; repression FADS2 Mlig034529.g2 {REF} {Length: 3862} {TRANSSPLICED} {Pfam: Fatty acid desaturase [PF00487.24, score=117.1]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.28, score=75.0]} {Human: ENSG00000134824, FADS2, fatty acid desaturase 2, [RH, Score=429, Expect=6e-148]; ENSG00000149485, FADS1, fatty acid desaturase 1, [RH, Score=426, Expect=8e-146]} {Mouse: ENSMUSG00000024665, Fads2, fatty acid desaturase 2, [RH, Score=446, Expect=7e-155]} {Dmel: FBgn0029854, CG3566, [Score=56.2, Expect=7e-10]} {Celegans: WBGene00001395, fat-3, Delta(6)-fatty-acid desaturase fat-3, [Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_10869_0_1, dd_Smed_v6_10869_0_1, [Score=328, Expect=3e-109]} {Ipul: Ipul000560.g1, Ipul000560.g1, [Score=396, Expect=3e-135]} {RNA1509_15864, RNA1509_1792, RNA1509_9754} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: repression [28]}
First Previous 1 2 3 Next Last
Berezikov Lab - 2016-2020 © ERIBA